Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.23■□□□□ 0.19
Cd74P04441 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cd74P04441 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cd74P04441 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cd74P04441 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cd74P04441 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cd74P04441 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Cd74P04441 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.23■□□□□ 0.19
Cd74P04441 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cd74P04441 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cd74P04441 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd74P04441 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cd74P04441 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.22■□□□□ 0.19
Cd74P04441 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cd74P04441 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.22■□□□□ 0.19
Cd74P04441 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.22■□□□□ 0.19
Cd74P04441 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.22■□□□□ 0.19
Cd74P04441 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd74P04441 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.21■□□□□ 0.19
Cd74P04441 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Cd74P04441 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.21■□□□□ 0.19
Cd74P04441 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Cd74P04441 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.21■□□□□ 0.19
Cd74P04441 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd74P04441 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cd74P04441 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd74P04441 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.2■□□□□ 0.18
Cd74P04441 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.2■□□□□ 0.18
Cd74P04441 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.2■□□□□ 0.18
Cd74P04441 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.2■□□□□ 0.18
Cd74P04441 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cd74P04441 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cd74P04441 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd74P04441 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Cd74P04441 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.19■□□□□ 0.18
Cd74P04441 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cd74P04441 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.19■□□□□ 0.18
Cd74P04441 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cd74P04441 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Gm43017-201ENSMUST00000198296 752 ntBASIC16.19■□□□□ 0.18
Cd74P04441 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cd74P04441 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.19■□□□□ 0.18
Cd74P04441 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.19■□□□□ 0.18
Cd74P04441 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cd74P04441 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.18■□□□□ 0.18
Cd74P04441 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cd74P04441 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cd74P04441 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.18■□□□□ 0.18
Cd74P04441 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms