Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.72■□□□□ 0.11
P04212 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Gm14117-201ENSMUST00000122417 843 ntBASIC15.72■□□□□ 0.11
P04212 Rps24-207ENSMUST00000224568 714 ntBASIC15.72■□□□□ 0.11
P04212 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.72■□□□□ 0.11
P04212 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04212 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.71■□□□□ 0.11
P04212 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04212 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
P04212 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
P04212 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.7■□□□□ 0.1
P04212 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.7■□□□□ 0.1
P04212 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
P04212 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04212 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04212 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.69■□□□□ 0.1
P04212 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
P04212 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
P04212 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
P04212 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04212 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
P04212 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.69■□□□□ 0.1
P04212 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.69■□□□□ 0.1
P04212 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04212 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04212 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04212 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04212 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04212 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04212 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.68■□□□□ 0.1
P04212 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.68■□□□□ 0.1
P04212 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
P04212 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.68■□□□□ 0.1
P04212 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04212 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
P04212 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
P04212 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04212 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04212 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
P04212 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04212 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P04212 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04212 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
P04212 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.66■□□□□ 0.1
P04212 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04212 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.66■□□□□ 0.1
P04212 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.65■□□□□ 0.1
P04212 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
P04212 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.65■□□□□ 0.1
P04212 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.65■□□□□ 0.1
P04212 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04212 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04212 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.65■□□□□ 0.1
P04212 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms