Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CfdP03953 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CfdP03953 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CfdP03953 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CfdP03953 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CfdP03953 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CfdP03953 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CfdP03953 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CfdP03953 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.27■□□□□ 0.2
CfdP03953 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CfdP03953 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CfdP03953 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CfdP03953 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CfdP03953 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CfdP03953 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CfdP03953 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CfdP03953 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CfdP03953 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CfdP03953 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
CfdP03953 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CfdP03953 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CfdP03953 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CfdP03953 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.25■□□□□ 0.19
CfdP03953 Gm12366-201ENSMUST00000121722 873 ntBASIC16.25■□□□□ 0.19
CfdP03953 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.25■□□□□ 0.19
CfdP03953 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CfdP03953 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.25■□□□□ 0.19
CfdP03953 Gm5786-201ENSMUST00000085368 882 ntBASIC16.25■□□□□ 0.19
CfdP03953 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CfdP03953 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CfdP03953 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CfdP03953 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CfdP03953 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.24■□□□□ 0.19
CfdP03953 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CfdP03953 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CfdP03953 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CfdP03953 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CfdP03953 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CfdP03953 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CfdP03953 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CfdP03953 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CfdP03953 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CfdP03953 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CfdP03953 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CfdP03953 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CfdP03953 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CfdP03953 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CfdP03953 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.23■□□□□ 0.19
CfdP03953 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CfdP03953 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.22■□□□□ 0.19
CfdP03953 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CfdP03953 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 Gm10399-202ENSMUST00000202768 748 ntBASIC16.21■□□□□ 0.19
CfdP03953 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.21■□□□□ 0.19
CfdP03953 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CfdP03953 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms