Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Gm11421-201ENSMUST00000122124 294 ntBASIC16.26■□□□□ 0.19
Hoxa3P02831 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hoxa3P02831 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hoxa3P02831 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hoxa3P02831 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxa3P02831 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Hoxa3P02831 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hoxa3P02831 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.24■□□□□ 0.19
Hoxa3P02831 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.24■□□□□ 0.19
Hoxa3P02831 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Hoxa3P02831 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxa3P02831 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hoxa3P02831 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hoxa3P02831 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxa3P02831 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hoxa3P02831 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.23■□□□□ 0.19
Hoxa3P02831 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.23■□□□□ 0.19
Hoxa3P02831 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.23■□□□□ 0.19
Hoxa3P02831 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.23■□□□□ 0.19
Hoxa3P02831 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hoxa3P02831 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Hoxa3P02831 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxa3P02831 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxa3P02831 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.23■□□□□ 0.19
Hoxa3P02831 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.22■□□□□ 0.19
Hoxa3P02831 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hoxa3P02831 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Hoxa3P02831 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Hoxa3P02831 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Hoxa3P02831 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxa3P02831 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hoxa3P02831 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.21■□□□□ 0.19
Hoxa3P02831 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hoxa3P02831 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hoxa3P02831 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.21■□□□□ 0.19
Hoxa3P02831 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxa3P02831 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxa3P02831 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxa3P02831 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxa3P02831 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxa3P02831 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxa3P02831 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxa3P02831 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.21■□□□□ 0.18
Hoxa3P02831 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Hoxa3P02831 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 Gm10849-201ENSMUST00000100397 618 ntBASIC16.2■□□□□ 0.18
Hoxa3P02831 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxa3P02831 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxa3P02831 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.2■□□□□ 0.18
Hoxa3P02831 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hoxa3P02831 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxa3P02831 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms