Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tp53P02340 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tp53P02340 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tp53P02340 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tp53P02340 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tp53P02340 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tp53P02340 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tp53P02340 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tp53P02340 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tp53P02340 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tp53P02340 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tp53P02340 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tp53P02340 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tp53P02340 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Tp53P02340 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tp53P02340 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Tp53P02340 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tp53P02340 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tp53P02340 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tp53P02340 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tp53P02340 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tp53P02340 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.05■□□□□ 0.96
Tp53P02340 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tp53P02340 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tp53P02340 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tp53P02340 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tp53P02340 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tp53P02340 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Tp53P02340 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tp53P02340 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tp53P02340 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tp53P02340 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tp53P02340 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tp53P02340 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.03■□□□□ 0.96
Tp53P02340 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tp53P02340 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Tp53P02340 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.03■□□□□ 0.96
Tp53P02340 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tp53P02340 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tp53P02340 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tp53P02340 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.03■□□□□ 0.96
Tp53P02340 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tp53P02340 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tp53P02340 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Tp53P02340 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tp53P02340 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tp53P02340 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.02■□□□□ 0.96
Tp53P02340 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tp53P02340 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tp53P02340 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tp53P02340 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.02■□□□□ 0.96
Tp53P02340 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Tp53P02340 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tp53P02340 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tp53P02340 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tp53P02340 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tp53P02340 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tp53P02340 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tp53P02340 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Tp53P02340 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tp53P02340 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Tp53P02340 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tp53P02340 Iqck-206ENSMUST00000208658 2891 ntBASIC21■□□□□ 0.95
Tp53P02340 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tp53P02340 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tp53P02340 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tp53P02340 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tp53P02340 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Tp53P02340 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tp53P02340 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.99■□□□□ 0.95
Tp53P02340 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tp53P02340 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.99■□□□□ 0.95
Tp53P02340 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.99■□□□□ 0.95
Tp53P02340 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.98■□□□□ 0.95
Tp53P02340 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tp53P02340 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tp53P02340 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms