Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.76■□□□□ 0.43
P01852 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
P01852 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
P01852 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.75■□□□□ 0.43
P01852 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
P01852 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01852 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.74■□□□□ 0.43
P01852 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
P01852 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.74■□□□□ 0.43
P01852 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.74■□□□□ 0.43
P01852 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
P01852 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
P01852 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01852 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.73■□□□□ 0.43
P01852 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
P01852 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01852 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01852 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01852 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01852 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
P01852 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.72■□□□□ 0.43
P01852 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Gm11421-201ENSMUST00000122124 294 ntBASIC17.72■□□□□ 0.43
P01852 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
P01852 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P01852 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01852 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01852 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
P01852 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01852 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P01852 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01852 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01852 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
P01852 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P01852 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P01852 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P01852 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P01852 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P01852 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01852 Gm43060-201ENSMUST00000200621 289 ntBASIC17.7■□□□□ 0.42
P01852 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P01852 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01852 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.7■□□□□ 0.42
P01852 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01852 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P01852 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.69■□□□□ 0.42
P01852 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01852 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
P01852 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.69■□□□□ 0.42
P01852 Gm40848-201ENSMUST00000221998 324 ntBASIC17.69■□□□□ 0.42
P01852 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01852 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.69■□□□□ 0.42
P01852 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01852 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
P01852 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.68■□□□□ 0.42
P01852 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01852 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01852 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01852 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.68■□□□□ 0.42
P01852 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
P01852 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
P01852 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01852 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01852 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms