Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.16□□□□□ -0.14
TcraP01849 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.16□□□□□ -0.14
TcraP01849 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TcraP01849 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TcraP01849 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.15□□□□□ -0.14
TcraP01849 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TcraP01849 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.15□□□□□ -0.14
TcraP01849 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TcraP01849 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.15□□□□□ -0.14
TcraP01849 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TcraP01849 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TcraP01849 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TcraP01849 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TcraP01849 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TcraP01849 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TcraP01849 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TcraP01849 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TcraP01849 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.14□□□□□ -0.15
TcraP01849 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.13□□□□□ -0.15
TcraP01849 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TcraP01849 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TcraP01849 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.12□□□□□ -0.15
TcraP01849 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.12□□□□□ -0.15
TcraP01849 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TcraP01849 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TcraP01849 Rarb-207ENSMUST00000225921 2756 ntBASIC14.12□□□□□ -0.15
TcraP01849 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TcraP01849 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TcraP01849 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TcraP01849 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.11□□□□□ -0.15
TcraP01849 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TcraP01849 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TcraP01849 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TcraP01849 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TcraP01849 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TcraP01849 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.1□□□□□ -0.15
TcraP01849 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms