Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01728 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
P01728 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.29■□□□□ 0.04
P01728 Gm45444-201ENSMUST00000211394 898 ntBASIC15.29■□□□□ 0.04
P01728 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
P01728 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01728 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01728 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
P01728 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.28■□□□□ 0.04
P01728 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01728 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01728 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01728 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01728 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
P01728 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01728 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01728 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01728 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.27■□□□□ 0.04
P01728 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.27■□□□□ 0.04
P01728 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.27■□□□□ 0.04
P01728 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.27■□□□□ 0.04
P01728 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.27■□□□□ 0.04
P01728 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01728 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
P01728 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.27■□□□□ 0.03
P01728 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01728 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01728 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01728 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.27■□□□□ 0.03
P01728 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01728 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.26■□□□□ 0.03
P01728 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.26■□□□□ 0.03
P01728 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01728 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.26■□□□□ 0.03
P01728 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.26■□□□□ 0.03
P01728 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
P01728 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.25■□□□□ 0.03
P01728 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.25■□□□□ 0.03
P01728 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P01728 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01728 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.24■□□□□ 0.03
P01728 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P01728 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.24■□□□□ 0.03
P01728 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.24■□□□□ 0.03
P01728 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.24■□□□□ 0.03
P01728 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P01728 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 AA386476-201ENSMUST00000098781 1665 ntBASIC15.24■□□□□ 0.03
P01728 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P01728 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01728 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms