Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn4O89029 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Matn4O89029 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Matn4O89029 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn4O89029 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn4O89029 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn4O89029 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn4O89029 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn4O89029 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn4O89029 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Matn4O89029 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Matn4O89029 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Matn4O89029 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Gm7417-201ENSMUST00000192950 473 ntBASIC18.39■□□□□ 0.53
Matn4O89029 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.39■□□□□ 0.53
Matn4O89029 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.39■□□□□ 0.53
Matn4O89029 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn4O89029 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Matn4O89029 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Matn4O89029 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Matn4O89029 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Matn4O89029 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Matn4O89029 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn4O89029 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn4O89029 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Matn4O89029 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.37■□□□□ 0.53
Matn4O89029 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn4O89029 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn4O89029 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn4O89029 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn4O89029 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Matn4O89029 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn4O89029 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Matn4O89029 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Matn4O89029 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Matn4O89029 BC021767-201ENSMUST00000126387 1716 ntBASIC18.36■□□□□ 0.53
Matn4O89029 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Matn4O89029 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Matn4O89029 Gm15820-201ENSMUST00000201566 728 ntBASIC18.36■□□□□ 0.53
Matn4O89029 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Matn4O89029 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.36■□□□□ 0.53
Matn4O89029 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Matn4O89029 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Matn4O89029 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.35■□□□□ 0.53
Matn4O89029 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Matn4O89029 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Matn4O89029 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Matn4O89029 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.34■□□□□ 0.53
Matn4O89029 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Matn4O89029 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.34■□□□□ 0.53
Matn4O89029 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Matn4O89029 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.34■□□□□ 0.53
Matn4O89029 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.34■□□□□ 0.53
Matn4O89029 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Matn4O89029 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Matn4O89029 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn4O89029 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Matn4O89029 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Matn4O89029 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.33■□□□□ 0.53
Matn4O89029 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Matn4O89029 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Matn4O89029 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.33■□□□□ 0.52
Matn4O89029 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Matn4O89029 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Matn4O89029 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Matn4O89029 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Matn4O89029 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms