Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Hdac3O88895 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hdac3O88895 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac3O88895 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Hdac3O88895 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Gm13241-201ENSMUST00000094493 780 ntBASIC17.29■□□□□ 0.36
Hdac3O88895 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hdac3O88895 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Hdac3O88895 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac3O88895 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.28■□□□□ 0.36
Hdac3O88895 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac3O88895 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Hdac3O88895 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac3O88895 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hdac3O88895 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac3O88895 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac3O88895 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac3O88895 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac3O88895 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac3O88895 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.26■□□□□ 0.35
Hdac3O88895 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.26■□□□□ 0.35
Hdac3O88895 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac3O88895 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Hdac3O88895 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hdac3O88895 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hdac3O88895 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac3O88895 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.24■□□□□ 0.35
Hdac3O88895 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac3O88895 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.24■□□□□ 0.35
Hdac3O88895 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.24■□□□□ 0.35
Hdac3O88895 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hdac3O88895 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac3O88895 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac3O88895 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hdac3O88895 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hdac3O88895 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hdac3O88895 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Hdac3O88895 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hdac3O88895 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.23■□□□□ 0.35
Hdac3O88895 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.23■□□□□ 0.35
Hdac3O88895 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.23■□□□□ 0.35
Hdac3O88895 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac3O88895 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.22■□□□□ 0.35
Hdac3O88895 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hdac3O88895 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac3O88895 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 478.1 ms