Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.18■□□□□ 0.34
CcnkO88874 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CcnkO88874 Golph3-205ENSMUST00000228671 2842 ntBASIC17.18■□□□□ 0.34
CcnkO88874 Etf1-202ENSMUST00000180351 108 ntBASIC17.18■□□□□ 0.34
CcnkO88874 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CcnkO88874 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CcnkO88874 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CcnkO88874 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CcnkO88874 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CcnkO88874 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CcnkO88874 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CcnkO88874 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CcnkO88874 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CcnkO88874 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.17■□□□□ 0.34
CcnkO88874 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CcnkO88874 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CcnkO88874 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CcnkO88874 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CcnkO88874 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CcnkO88874 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CcnkO88874 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcnkO88874 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.15■□□□□ 0.34
CcnkO88874 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CcnkO88874 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.15■□□□□ 0.34
CcnkO88874 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.15■□□□□ 0.34
CcnkO88874 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.15■□□□□ 0.34
CcnkO88874 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.15■□□□□ 0.34
CcnkO88874 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CcnkO88874 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CcnkO88874 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CcnkO88874 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcnkO88874 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CcnkO88874 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CcnkO88874 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CcnkO88874 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.14■□□□□ 0.33
CcnkO88874 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CcnkO88874 Gm9959-201ENSMUST00000068277 390 ntBASIC17.14■□□□□ 0.33
CcnkO88874 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.14■□□□□ 0.33
CcnkO88874 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcnkO88874 Grk6-206ENSMUST00000224995 2971 ntBASIC17.13■□□□□ 0.33
CcnkO88874 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.13■□□□□ 0.33
CcnkO88874 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.13■□□□□ 0.33
CcnkO88874 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcnkO88874 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcnkO88874 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CcnkO88874 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CcnkO88874 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcnkO88874 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcnkO88874 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcnkO88874 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CcnkO88874 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.12■□□□□ 0.33
CcnkO88874 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms