Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hcn3O88705 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.59■□□□□ 0.57
Hcn3O88705 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.59■□□□□ 0.57
Hcn3O88705 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Hcn3O88705 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 BC021767-201ENSMUST00000126387 1716 ntBASIC18.59■□□□□ 0.57
Hcn3O88705 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn3O88705 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hcn3O88705 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.58■□□□□ 0.57
Hcn3O88705 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Hcn3O88705 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Hcn3O88705 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn3O88705 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hcn3O88705 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hcn3O88705 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 Gm10399-202ENSMUST00000202768 748 ntBASIC18.57■□□□□ 0.56
Hcn3O88705 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.57■□□□□ 0.56
Hcn3O88705 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hcn3O88705 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hcn3O88705 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn3O88705 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn3O88705 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn3O88705 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn3O88705 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.56■□□□□ 0.56
Hcn3O88705 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.56■□□□□ 0.56
Hcn3O88705 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hcn3O88705 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.56■□□□□ 0.56
Hcn3O88705 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn3O88705 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.55■□□□□ 0.56
Hcn3O88705 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.55■□□□□ 0.56
Hcn3O88705 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Hcn3O88705 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn3O88705 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hcn3O88705 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.54■□□□□ 0.56
Hcn3O88705 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.54■□□□□ 0.56
Hcn3O88705 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hcn3O88705 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn3O88705 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.53■□□□□ 0.56
Hcn3O88705 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Hcn3O88705 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hcn3O88705 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn3O88705 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Hcn3O88705 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.52■□□□□ 0.56
Hcn3O88705 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn3O88705 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms