Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.54■□□□□ 0.56
Hcn1O88704 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn1O88704 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn1O88704 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn1O88704 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn1O88704 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn1O88704 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcn1O88704 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn1O88704 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.52■□□□□ 0.56
Hcn1O88704 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn1O88704 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.52■□□□□ 0.56
Hcn1O88704 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn1O88704 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn1O88704 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcn1O88704 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Hcn1O88704 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hcn1O88704 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hcn1O88704 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hcn1O88704 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hcn1O88704 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hcn1O88704 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.51■□□□□ 0.55
Hcn1O88704 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hcn1O88704 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcn1O88704 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn1O88704 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn1O88704 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn1O88704 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.5■□□□□ 0.55
Hcn1O88704 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hcn1O88704 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.5■□□□□ 0.55
Hcn1O88704 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn1O88704 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hcn1O88704 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcn1O88704 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
Hcn1O88704 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.49■□□□□ 0.55
Hcn1O88704 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
Hcn1O88704 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.49■□□□□ 0.55
Hcn1O88704 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hcn1O88704 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcn1O88704 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn1O88704 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn1O88704 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn1O88704 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn1O88704 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn1O88704 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn1O88704 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcn1O88704 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Hcn1O88704 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.47■□□□□ 0.55
Hcn1O88704 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hcn1O88704 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hcn1O88704 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcn1O88704 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Hcn1O88704 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.46■□□□□ 0.55
Hcn1O88704 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.46■□□□□ 0.55
Hcn1O88704 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.46■□□□□ 0.55
Hcn1O88704 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hcn1O88704 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcn1O88704 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hcn1O88704 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms