Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.91■□□□□ 0.78
Cldn2O88552 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.91■□□□□ 0.78
Cldn2O88552 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn2O88552 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cldn2O88552 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn2O88552 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn2O88552 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn2O88552 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn2O88552 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn2O88552 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn2O88552 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn2O88552 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn2O88552 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.9■□□□□ 0.78
Cldn2O88552 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.9■□□□□ 0.78
Cldn2O88552 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cldn2O88552 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.9■□□□□ 0.78
Cldn2O88552 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
Cldn2O88552 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cldn2O88552 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cldn2O88552 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn2O88552 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn2O88552 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn2O88552 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn2O88552 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cldn2O88552 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn2O88552 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn2O88552 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn2O88552 Gm13146-201ENSMUST00000118508 780 ntBASIC19.88■□□□□ 0.77
Cldn2O88552 Mir5133-201ENSMUST00000174955 77 ntBASIC19.88■□□□□ 0.77
Cldn2O88552 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.88■□□□□ 0.77
Cldn2O88552 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn2O88552 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn2O88552 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn2O88552 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn2O88552 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.87■□□□□ 0.77
Cldn2O88552 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.87■□□□□ 0.77
Cldn2O88552 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cldn2O88552 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn2O88552 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn2O88552 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn2O88552 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn2O88552 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn2O88552 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.86■□□□□ 0.77
Cldn2O88552 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn2O88552 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn2O88552 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.86■□□□□ 0.77
Cldn2O88552 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cldn2O88552 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldn2O88552 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn2O88552 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn2O88552 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn2O88552 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cldn2O88552 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn2O88552 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn2O88552 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn2O88552 Gm6420-201ENSMUST00000193885 723 ntBASIC19.84■□□□□ 0.77
Cldn2O88552 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.84■□□□□ 0.77
Cldn2O88552 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn2O88552 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cldn2O88552 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.84■□□□□ 0.77
Cldn2O88552 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn2O88552 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.84■□□□□ 0.77
Cldn2O88552 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cldn2O88552 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn2O88552 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cldn2O88552 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn2O88552 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.83■□□□□ 0.77
Cldn2O88552 Nespas-201ENSMUST00000143738 1083 ntBASIC19.83■□□□□ 0.77
Cldn2O88552 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn2O88552 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.83■□□□□ 0.77
Cldn2O88552 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn2O88552 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.83■□□□□ 0.77
Cldn2O88552 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn2O88552 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn2O88552 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Cldn2O88552 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn2O88552 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn2O88552 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn2O88552 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn2O88552 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn2O88552 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn2O88552 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cldn2O88552 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn2O88552 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms