Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Gm45417-201ENSMUST00000209533 758 ntBASIC20.1■□□□□ 0.81
Shoc2O88520 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shoc2O88520 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.1■□□□□ 0.81
Shoc2O88520 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shoc2O88520 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Shoc2O88520 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shoc2O88520 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.1■□□□□ 0.81
Shoc2O88520 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shoc2O88520 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shoc2O88520 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shoc2O88520 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shoc2O88520 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shoc2O88520 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.09■□□□□ 0.81
Shoc2O88520 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shoc2O88520 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shoc2O88520 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shoc2O88520 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shoc2O88520 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shoc2O88520 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shoc2O88520 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.07■□□□□ 0.8
Shoc2O88520 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shoc2O88520 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Shoc2O88520 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Shoc2O88520 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Shoc2O88520 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shoc2O88520 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Shoc2O88520 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shoc2O88520 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shoc2O88520 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shoc2O88520 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Shoc2O88520 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shoc2O88520 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shoc2O88520 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shoc2O88520 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.06■□□□□ 0.8
Shoc2O88520 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shoc2O88520 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.06■□□□□ 0.8
Shoc2O88520 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shoc2O88520 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.06■□□□□ 0.8
Shoc2O88520 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shoc2O88520 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Shoc2O88520 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shoc2O88520 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Shoc2O88520 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shoc2O88520 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shoc2O88520 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shoc2O88520 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shoc2O88520 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shoc2O88520 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Shoc2O88520 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Shoc2O88520 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shoc2O88520 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shoc2O88520 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Shoc2O88520 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Shoc2O88520 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Shoc2O88520 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.05■□□□□ 0.8
Shoc2O88520 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Shoc2O88520 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.04■□□□□ 0.8
Shoc2O88520 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.04■□□□□ 0.8
Shoc2O88520 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Shoc2O88520 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shoc2O88520 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.03■□□□□ 0.8
Shoc2O88520 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Shoc2O88520 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Shoc2O88520 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.03■□□□□ 0.8
Shoc2O88520 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Shoc2O88520 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Shoc2O88520 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shoc2O88520 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.02■□□□□ 0.8
Shoc2O88520 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Mir7075-201ENSMUST00000184187 82 ntBASIC20.02■□□□□ 0.8
Shoc2O88520 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shoc2O88520 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Shoc2O88520 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms