Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1hO88427 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1hO88427 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1hO88427 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1hO88427 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1hO88427 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1hO88427 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1hO88427 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cacna1hO88427 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.2■□□□□ 0.66
Cacna1hO88427 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cacna1hO88427 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cacna1hO88427 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.2■□□□□ 0.66
Cacna1hO88427 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1hO88427 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.19■□□□□ 0.66
Cacna1hO88427 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1hO88427 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1hO88427 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.19■□□□□ 0.66
Cacna1hO88427 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1hO88427 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.19■□□□□ 0.66
Cacna1hO88427 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1hO88427 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1hO88427 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Cacna1hO88427 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1hO88427 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1hO88427 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1hO88427 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cacna1hO88427 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.18■□□□□ 0.66
Cacna1hO88427 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1hO88427 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.18■□□□□ 0.66
Cacna1hO88427 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cacna1hO88427 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Cacna1hO88427 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1hO88427 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1hO88427 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1hO88427 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1hO88427 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacna1hO88427 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1hO88427 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cacna1hO88427 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1hO88427 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1hO88427 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1hO88427 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.16■□□□□ 0.66
Cacna1hO88427 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.16■□□□□ 0.66
Cacna1hO88427 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Cacna1hO88427 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.15■□□□□ 0.66
Cacna1hO88427 Gm18666-201ENSMUST00000190039 958 ntBASIC19.15■□□□□ 0.66
Cacna1hO88427 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1hO88427 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1hO88427 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.15■□□□□ 0.66
Cacna1hO88427 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cacna1hO88427 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1hO88427 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1hO88427 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cacna1hO88427 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1hO88427 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1hO88427 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Cacna1hO88427 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.14■□□□□ 0.66
Cacna1hO88427 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1hO88427 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.14■□□□□ 0.66
Cacna1hO88427 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.14■□□□□ 0.65
Cacna1hO88427 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cacna1hO88427 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.14■□□□□ 0.65
Cacna1hO88427 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.14■□□□□ 0.65
Cacna1hO88427 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.14■□□□□ 0.65
Cacna1hO88427 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.14■□□□□ 0.65
Cacna1hO88427 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.14■□□□□ 0.65
Cacna1hO88427 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1hO88427 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1hO88427 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1hO88427 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1hO88427 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.13■□□□□ 0.65
Cacna1hO88427 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1hO88427 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.13■□□□□ 0.65
Cacna1hO88427 Mir6236-201ENSMUST00000184437 123 ntBASIC19.13■□□□□ 0.65
Cacna1hO88427 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.13■□□□□ 0.65
Cacna1hO88427 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.13■□□□□ 0.65
Cacna1hO88427 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms