Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Gm42642-201ENSMUST00000200683 355 ntBASIC15.07■□□□□ 0
Gm10226O88253 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.07■□□□□ 0
Gm10226O88253 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.07■□□□□ 0
Gm10226O88253 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.07■□□□□ 0
Gm10226O88253 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.07■□□□□ 0
Gm10226O88253 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm10226O88253 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm10226O88253 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10226O88253 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.06■□□□□ 0
Gm10226O88253 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.06■□□□□ 0
Gm10226O88253 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.06■□□□□ 0
Gm10226O88253 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.06■□□□□ 0
Gm10226O88253 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Gm10226O88253 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm10226O88253 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm10226O88253 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Gm10226O88253 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Gm10226O88253 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm10226O88253 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm10226O88253 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm10226O88253 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm10226O88253 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.05■□□□□ 0
Gm10226O88253 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.05■□□□□ 0
Gm10226O88253 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm10226O88253 Gm42778-201ENSMUST00000199644 553 ntBASIC15.05■□□□□ -0
Gm10226O88253 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10226O88253 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm10226O88253 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
Gm10226O88253 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10226O88253 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10226O88253 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10226O88253 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10226O88253 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Gm10226O88253 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Gm10226O88253 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.04■□□□□ -0
Gm10226O88253 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Gm10033-202ENSMUST00000211874 928 ntBASIC15.04■□□□□ -0
Gm10226O88253 Gm18671-201ENSMUST00000214826 683 ntBASIC15.04■□□□□ -0
Gm10226O88253 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10226O88253 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Gm10226O88253 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gm10226O88253 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gm10226O88253 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Gm10226O88253 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.03■□□□□ -0
Gm10226O88253 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Gm10226O88253 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm10226O88253 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Gm10226O88253 Reep4-203ENSMUST00000226563 1444 ntBASIC15.02■□□□□ -0
Gm10226O88253 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm10226O88253 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Gm10226O88253 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm10226O88253 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm10226O88253 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm10226O88253 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm10226O88253 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm10226O88253 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Gm10226O88253 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm10226O88253 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10226O88253 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10226O88253 Gm10849-201ENSMUST00000100397 618 ntBASIC15.01□□□□□ -0.01
Gm10226O88253 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10226O88253 Gm13234-201ENSMUST00000120010 747 ntBASIC15.01□□□□□ -0.01
Gm10226O88253 Gm26571-201ENSMUST00000181399 666 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms