Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gm10139O88245 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Gm10139O88245 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm10139O88245 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gm10139O88245 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm10139O88245 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm10139O88245 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Gm10139O88245 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Gm10139O88245 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm10139O88245 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm10139O88245 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm10139O88245 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm10139O88245 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm10139O88245 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm10139O88245 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm10139O88245 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm10139O88245 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.84□□□□□ -0.51
Gm10139O88245 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 AC093043.1-201ENSMUST00000226700 898 ntBASIC11.84□□□□□ -0.51
Gm10139O88245 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Gm10139O88245 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm10139O88245 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm10139O88245 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm10139O88245 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm10139O88245 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm10139O88245 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC11.83□□□□□ -0.51
Gm10139O88245 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm10139O88245 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm10139O88245 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm10139O88245 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Gm10139O88245 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.83□□□□□ -0.52
Gm10139O88245 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm10139O88245 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.52
Gm10139O88245 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Gm10139O88245 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm10139O88245 Gm5784-201ENSMUST00000179344 2478 ntBASIC11.82□□□□□ -0.52
Gm10139O88245 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm10139O88245 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm10139O88245 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm10139O88245 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC11.82□□□□□ -0.52
Gm10139O88245 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms