Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip1O70479 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnfaip1O70479 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip1O70479 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip1O70479 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip1O70479 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnfaip1O70479 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfaip1O70479 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfaip1O70479 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnfaip1O70479 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tnfaip1O70479 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfaip1O70479 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip1O70479 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tnfaip1O70479 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip1O70479 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.62■□□□□ 0.89
Tnfaip1O70479 Gm13168-201ENSMUST00000121771 632 ntBASIC20.62■□□□□ 0.89
Tnfaip1O70479 Gm20049-201ENSMUST00000219950 730 ntBASIC20.62■□□□□ 0.89
Tnfaip1O70479 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip1O70479 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip1O70479 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tnfaip1O70479 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.62■□□□□ 0.89
Tnfaip1O70479 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tnfaip1O70479 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.61■□□□□ 0.89
Tnfaip1O70479 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.61■□□□□ 0.89
Tnfaip1O70479 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tnfaip1O70479 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip1O70479 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.6■□□□□ 0.89
Tnfaip1O70479 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.6■□□□□ 0.89
Tnfaip1O70479 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.6■□□□□ 0.89
Tnfaip1O70479 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.6■□□□□ 0.89
Tnfaip1O70479 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip1O70479 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfaip1O70479 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfaip1O70479 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.58■□□□□ 0.89
Tnfaip1O70479 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfaip1O70479 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.58■□□□□ 0.89
Tnfaip1O70479 Gm10252-201ENSMUST00000209541 832 ntBASIC20.58■□□□□ 0.89
Tnfaip1O70479 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Tnfaip1O70479 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.58■□□□□ 0.89
Tnfaip1O70479 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Tnfaip1O70479 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfaip1O70479 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfaip1O70479 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfaip1O70479 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfaip1O70479 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Tnfaip1O70479 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfaip1O70479 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.57■□□□□ 0.88
Tnfaip1O70479 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnfaip1O70479 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfaip1O70479 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
Tnfaip1O70479 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms