Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pknox1O70477 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pknox1O70477 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.67
Pknox1O70477 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pknox1O70477 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pknox1O70477 AA386476-201ENSMUST00000098781 1665 ntBASIC19.27■□□□□ 0.67
Pknox1O70477 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pknox1O70477 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox1O70477 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.25■□□□□ 0.67
Pknox1O70477 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pknox1O70477 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Pknox1O70477 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox1O70477 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox1O70477 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.24■□□□□ 0.67
Pknox1O70477 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox1O70477 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox1O70477 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.24■□□□□ 0.67
Pknox1O70477 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox1O70477 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pknox1O70477 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.24■□□□□ 0.67
Pknox1O70477 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox1O70477 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pknox1O70477 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.23■□□□□ 0.67
Pknox1O70477 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox1O70477 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.23■□□□□ 0.67
Pknox1O70477 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox1O70477 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox1O70477 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox1O70477 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.23■□□□□ 0.67
Pknox1O70477 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox1O70477 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.22■□□□□ 0.67
Pknox1O70477 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox1O70477 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox1O70477 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.22■□□□□ 0.67
Pknox1O70477 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox1O70477 Golgb1-201ENSMUST00000023534 498 ntBASIC19.22■□□□□ 0.67
Pknox1O70477 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox1O70477 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox1O70477 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox1O70477 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pknox1O70477 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pknox1O70477 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pknox1O70477 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pknox1O70477 Gm12922-201ENSMUST00000120626 809 ntBASIC19.21■□□□□ 0.67
Pknox1O70477 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
Pknox1O70477 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.21■□□□□ 0.67
Pknox1O70477 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Pknox1O70477 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox1O70477 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.2■□□□□ 0.66
Pknox1O70477 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pknox1O70477 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pknox1O70477 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pknox1O70477 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Golph3-205ENSMUST00000228671 2842 ntBASIC19.19■□□□□ 0.66
Pknox1O70477 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.19■□□□□ 0.66
Pknox1O70477 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.19■□□□□ 0.66
Pknox1O70477 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pknox1O70477 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pknox1O70477 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms