Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx3O70137 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx3O70137 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx3O70137 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx3O70137 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Alx3O70137 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.59■□□□□ 0.41
Alx3O70137 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Alx3O70137 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx3O70137 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Alx3O70137 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx3O70137 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx3O70137 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Alx3O70137 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Alx3O70137 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.58■□□□□ 0.4
Alx3O70137 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx3O70137 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.58■□□□□ 0.4
Alx3O70137 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx3O70137 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Alx3O70137 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Alx3O70137 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx3O70137 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Alx3O70137 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Alx3O70137 Gm44487-201ENSMUST00000205145 325 ntBASIC17.57■□□□□ 0.4
Alx3O70137 Rps24-207ENSMUST00000224568 714 ntBASIC17.57■□□□□ 0.4
Alx3O70137 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx3O70137 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Alx3O70137 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.57■□□□□ 0.4
Alx3O70137 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx3O70137 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.57■□□□□ 0.4
Alx3O70137 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.56■□□□□ 0.4
Alx3O70137 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.56■□□□□ 0.4
Alx3O70137 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Alx3O70137 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.56■□□□□ 0.4
Alx3O70137 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.56■□□□□ 0.4
Alx3O70137 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx3O70137 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Alx3O70137 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx3O70137 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx3O70137 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Alx3O70137 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx3O70137 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Alx3O70137 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Alx3O70137 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.55■□□□□ 0.4
Alx3O70137 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.55■□□□□ 0.4
Alx3O70137 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Alx3O70137 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx3O70137 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx3O70137 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Alx3O70137 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx3O70137 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Alx3O70137 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.54■□□□□ 0.4
Alx3O70137 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.54■□□□□ 0.4
Alx3O70137 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx3O70137 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Grk6-206ENSMUST00000224995 2971 ntBASIC17.53■□□□□ 0.4
Alx3O70137 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx3O70137 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.53■□□□□ 0.4
Alx3O70137 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.53■□□□□ 0.4
Alx3O70137 Gm12922-201ENSMUST00000120626 809 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms