Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb2O55203 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb2O55203 Gm8493-201ENSMUST00000196881 489 ntBASIC19.41■□□□□ 0.7
Ldb2O55203 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb2O55203 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb2O55203 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb2O55203 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb2O55203 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb2O55203 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.4■□□□□ 0.7
Ldb2O55203 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb2O55203 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb2O55203 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ldb2O55203 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.4■□□□□ 0.7
Ldb2O55203 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb2O55203 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb2O55203 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Ldb2O55203 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb2O55203 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb2O55203 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb2O55203 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb2O55203 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb2O55203 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb2O55203 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.39■□□□□ 0.69
Ldb2O55203 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb2O55203 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ldb2O55203 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Smad6-203ENSMUST00000179458 273 ntBASIC19.38■□□□□ 0.69
Ldb2O55203 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.38■□□□□ 0.69
Ldb2O55203 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ldb2O55203 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb2O55203 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb2O55203 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.36■□□□□ 0.69
Ldb2O55203 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ldb2O55203 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb2O55203 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ldb2O55203 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb2O55203 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ldb2O55203 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb2O55203 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb2O55203 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.35■□□□□ 0.69
Ldb2O55203 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ldb2O55203 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb2O55203 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Ldb2O55203 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb2O55203 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb2O55203 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb2O55203 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb2O55203 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.33■□□□□ 0.69
Ldb2O55203 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.33■□□□□ 0.69
Ldb2O55203 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ldb2O55203 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ldb2O55203 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ldb2O55203 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.33■□□□□ 0.68
Ldb2O55203 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Ldb2O55203 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.32■□□□□ 0.68
Ldb2O55203 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ldb2O55203 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb2O55203 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.31■□□□□ 0.68
Ldb2O55203 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb2O55203 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb2O55203 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb2O55203 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ldb2O55203 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb2O55203 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb2O55203 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.3■□□□□ 0.68
Ldb2O55203 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ldb2O55203 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.3■□□□□ 0.68
Ldb2O55203 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ldb2O55203 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ldb2O55203 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb2O55203 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb2O55203 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms