Protein–RNA interactions for Protein: O55144

Tlx3, T-cell leukemia homeobox protein 3, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlx3O55144 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlx3O55144 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlx3O55144 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlx3O55144 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlx3O55144 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tlx3O55144 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tlx3O55144 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlx3O55144 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlx3O55144 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tlx3O55144 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlx3O55144 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlx3O55144 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.71■□□□□ 0.59
Tlx3O55144 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tlx3O55144 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlx3O55144 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlx3O55144 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tlx3O55144 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.7■□□□□ 0.58
Tlx3O55144 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tlx3O55144 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tlx3O55144 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.7■□□□□ 0.58
Tlx3O55144 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.7■□□□□ 0.58
Tlx3O55144 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tlx3O55144 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlx3O55144 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.7■□□□□ 0.58
Tlx3O55144 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.7■□□□□ 0.58
Tlx3O55144 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Tlx3O55144 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.7■□□□□ 0.58
Tlx3O55144 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Tlx3O55144 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlx3O55144 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Tlx3O55144 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Tlx3O55144 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Gm6420-201ENSMUST00000193885 723 ntBASIC18.69■□□□□ 0.58
Tlx3O55144 Trmt13-210ENSMUST00000198454 880 ntBASIC18.69■□□□□ 0.58
Tlx3O55144 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlx3O55144 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlx3O55144 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlx3O55144 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlx3O55144 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlx3O55144 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlx3O55144 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.68■□□□□ 0.58
Tlx3O55144 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.68■□□□□ 0.58
Tlx3O55144 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.68■□□□□ 0.58
Tlx3O55144 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlx3O55144 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlx3O55144 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Gm6211-202ENSMUST00000167849 925 ntBASIC18.67■□□□□ 0.58
Tlx3O55144 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tlx3O55144 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tlx3O55144 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlx3O55144 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tlx3O55144 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.66■□□□□ 0.58
Tlx3O55144 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.66■□□□□ 0.58
Tlx3O55144 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlx3O55144 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlx3O55144 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlx3O55144 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlx3O55144 Gm13836-201ENSMUST00000121159 501 ntBASIC18.65■□□□□ 0.58
Tlx3O55144 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.65■□□□□ 0.58
Tlx3O55144 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Tlx3O55144 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.65■□□□□ 0.58
Tlx3O55144 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tlx3O55144 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.65■□□□□ 0.58
Tlx3O55144 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.65■□□□□ 0.58
Tlx3O55144 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlx3O55144 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlx3O55144 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Tlx3O55144 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlx3O55144 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlx3O55144 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlx3O55144 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlx3O55144 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms