Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trdmt1O55055 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Trdmt1O55055 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trdmt1O55055 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trdmt1O55055 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.62■■□□□ 1.05
Trdmt1O55055 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trdmt1O55055 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trdmt1O55055 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trdmt1O55055 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trdmt1O55055 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trdmt1O55055 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trdmt1O55055 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.61■■□□□ 1.05
Trdmt1O55055 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trdmt1O55055 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.61■■□□□ 1.05
Trdmt1O55055 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trdmt1O55055 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trdmt1O55055 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdmt1O55055 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
Trdmt1O55055 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdmt1O55055 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdmt1O55055 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdmt1O55055 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdmt1O55055 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdmt1O55055 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.6■■□□□ 1.05
Trdmt1O55055 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdmt1O55055 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trdmt1O55055 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trdmt1O55055 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Trdmt1O55055 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.59■■□□□ 1.05
Trdmt1O55055 Gm5408-201ENSMUST00000197998 747 ntBASIC21.59■■□□□ 1.05
Trdmt1O55055 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.59■■□□□ 1.05
Trdmt1O55055 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Trdmt1O55055 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Trdmt1O55055 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trdmt1O55055 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trdmt1O55055 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trdmt1O55055 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trdmt1O55055 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Trdmt1O55055 Gm20760-201ENSMUST00000179197 648 ntBASIC21.58■■□□□ 1.05
Trdmt1O55055 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Trdmt1O55055 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trdmt1O55055 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trdmt1O55055 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Trdmt1O55055 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.57■■□□□ 1.04
Trdmt1O55055 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trdmt1O55055 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trdmt1O55055 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.57■■□□□ 1.04
Trdmt1O55055 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.57■■□□□ 1.04
Trdmt1O55055 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trdmt1O55055 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.56■■□□□ 1.04
Trdmt1O55055 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trdmt1O55055 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trdmt1O55055 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.56■■□□□ 1.04
Trdmt1O55055 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trdmt1O55055 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trdmt1O55055 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trdmt1O55055 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trdmt1O55055 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trdmt1O55055 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Trdmt1O55055 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Trdmt1O55055 Gm6211-202ENSMUST00000167849 925 ntBASIC21.55■■□□□ 1.04
Trdmt1O55055 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.55■■□□□ 1.04
Trdmt1O55055 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trdmt1O55055 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trdmt1O55055 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trdmt1O55055 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trdmt1O55055 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.54■■□□□ 1.04
Trdmt1O55055 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Trdmt1O55055 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trdmt1O55055 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trdmt1O55055 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Trdmt1O55055 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trdmt1O55055 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trdmt1O55055 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trdmt1O55055 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
Trdmt1O55055 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trdmt1O55055 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trdmt1O55055 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trdmt1O55055 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trdmt1O55055 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trdmt1O55055 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trdmt1O55055 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trdmt1O55055 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Trdmt1O55055 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trdmt1O55055 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Trdmt1O55055 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.52■■□□□ 1.04
Trdmt1O55055 Gm22240-201ENSMUST00000175225 82 ntBASIC21.52■■□□□ 1.04
Trdmt1O55055 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trdmt1O55055 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.52■■□□□ 1.04
Trdmt1O55055 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trdmt1O55055 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trdmt1O55055 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.52■■□□□ 1.03
Trdmt1O55055 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms