Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ChkaO54804 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.63■□□□□ 0.73
ChkaO54804 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.63■□□□□ 0.73
ChkaO54804 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ChkaO54804 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ChkaO54804 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
ChkaO54804 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChkaO54804 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ChkaO54804 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ChkaO54804 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChkaO54804 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
ChkaO54804 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ChkaO54804 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
ChkaO54804 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChkaO54804 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChkaO54804 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ChkaO54804 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ChkaO54804 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ChkaO54804 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
ChkaO54804 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ChkaO54804 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ChkaO54804 Golph3-205ENSMUST00000228671 2842 ntBASIC19.61■□□□□ 0.73
ChkaO54804 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ChkaO54804 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ChkaO54804 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ChkaO54804 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ChkaO54804 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
ChkaO54804 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ChkaO54804 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ChkaO54804 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
ChkaO54804 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ChkaO54804 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.59■□□□□ 0.73
ChkaO54804 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.59■□□□□ 0.73
ChkaO54804 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.59■□□□□ 0.73
ChkaO54804 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
ChkaO54804 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ChkaO54804 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
ChkaO54804 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ChkaO54804 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
ChkaO54804 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ChkaO54804 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ChkaO54804 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
ChkaO54804 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ChkaO54804 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.58■□□□□ 0.72
ChkaO54804 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.58■□□□□ 0.72
ChkaO54804 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ChkaO54804 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ChkaO54804 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.58■□□□□ 0.72
ChkaO54804 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ChkaO54804 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Gm12922-201ENSMUST00000120626 809 ntBASIC19.57■□□□□ 0.72
ChkaO54804 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.57■□□□□ 0.72
ChkaO54804 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ChkaO54804 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ChkaO54804 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ChkaO54804 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ChkaO54804 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ChkaO54804 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ChkaO54804 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ChkaO54804 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ChkaO54804 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
ChkaO54804 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ChkaO54804 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ChkaO54804 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ChkaO54804 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ChkaO54804 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ChkaO54804 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ChkaO54804 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ChkaO54804 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
ChkaO54804 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.55■□□□□ 0.72
ChkaO54804 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.55■□□□□ 0.72
ChkaO54804 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ChkaO54804 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ChkaO54804 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ChkaO54804 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms