Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DffbO54788 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.63■□□□□ 0.25
DffbO54788 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
DffbO54788 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DffbO54788 Golph3-205ENSMUST00000228671 2842 ntBASIC16.63■□□□□ 0.25
DffbO54788 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DffbO54788 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DffbO54788 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DffbO54788 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DffbO54788 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DffbO54788 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DffbO54788 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.62■□□□□ 0.25
DffbO54788 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
DffbO54788 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DffbO54788 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DffbO54788 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
DffbO54788 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
DffbO54788 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.61■□□□□ 0.25
DffbO54788 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.61■□□□□ 0.25
DffbO54788 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DffbO54788 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
DffbO54788 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DffbO54788 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DffbO54788 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DffbO54788 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DffbO54788 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DffbO54788 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DffbO54788 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
DffbO54788 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DffbO54788 Etf1-202ENSMUST00000180351 108 ntBASIC16.59■□□□□ 0.25
DffbO54788 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.59■□□□□ 0.25
DffbO54788 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DffbO54788 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DffbO54788 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
DffbO54788 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
DffbO54788 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.58■□□□□ 0.25
DffbO54788 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
DffbO54788 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
DffbO54788 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.58■□□□□ 0.24
DffbO54788 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.58■□□□□ 0.24
DffbO54788 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DffbO54788 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
DffbO54788 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.57■□□□□ 0.24
DffbO54788 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.57■□□□□ 0.24
DffbO54788 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
DffbO54788 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.57■□□□□ 0.24
DffbO54788 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DffbO54788 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.56■□□□□ 0.24
DffbO54788 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DffbO54788 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
DffbO54788 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
DffbO54788 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DffbO54788 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms