Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc4O35988 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc4O35988 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc4O35988 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc4O35988 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Sdc4O35988 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc4O35988 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc4O35988 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Sdc4O35988 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc4O35988 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc4O35988 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc4O35988 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.06■□□□□ 0.8
Sdc4O35988 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc4O35988 Gm13234-201ENSMUST00000120010 747 ntBASIC20.06■□□□□ 0.8
Sdc4O35988 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc4O35988 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Sdc4O35988 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.06■□□□□ 0.8
Sdc4O35988 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.06■□□□□ 0.8
Sdc4O35988 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc4O35988 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sdc4O35988 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.05■□□□□ 0.8
Sdc4O35988 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc4O35988 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.04■□□□□ 0.8
Sdc4O35988 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc4O35988 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.04■□□□□ 0.8
Sdc4O35988 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc4O35988 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc4O35988 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc4O35988 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc4O35988 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.04■□□□□ 0.8
Sdc4O35988 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc4O35988 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Sdc4O35988 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc4O35988 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sdc4O35988 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc4O35988 Reep4-203ENSMUST00000226563 1444 ntBASIC20.03■□□□□ 0.8
Sdc4O35988 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc4O35988 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc4O35988 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.03■□□□□ 0.8
Sdc4O35988 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc4O35988 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sdc4O35988 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc4O35988 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc4O35988 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc4O35988 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Sdc4O35988 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc4O35988 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc4O35988 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.02■□□□□ 0.8
Sdc4O35988 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc4O35988 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc4O35988 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc4O35988 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc4O35988 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sdc4O35988 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sdc4O35988 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sdc4O35988 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sdc4O35988 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Sdc4O35988 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc4O35988 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc4O35988 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.01■□□□□ 0.79
Sdc4O35988 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc4O35988 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc4O35988 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.01■□□□□ 0.79
Sdc4O35988 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Sdc4O35988 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc4O35988 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc4O35988 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20■□□□□ 0.79
Sdc4O35988 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Sdc4O35988 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc4O35988 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc4O35988 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.99■□□□□ 0.79
Sdc4O35988 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc4O35988 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc4O35988 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sdc4O35988 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc4O35988 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc4O35988 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc4O35988 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.99■□□□□ 0.79
Sdc4O35988 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Sdc4O35988 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc4O35988 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc4O35988 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.98■□□□□ 0.79
Sdc4O35988 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc4O35988 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sdc4O35988 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms