Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scamp3O35609 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scamp3O35609 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Scamp3O35609 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scamp3O35609 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scamp3O35609 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scamp3O35609 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scamp3O35609 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scamp3O35609 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scamp3O35609 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.32■□□□□ 0.68
Scamp3O35609 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.32■□□□□ 0.68
Scamp3O35609 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scamp3O35609 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.32■□□□□ 0.68
Scamp3O35609 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scamp3O35609 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.32■□□□□ 0.68
Scamp3O35609 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scamp3O35609 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scamp3O35609 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scamp3O35609 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scamp3O35609 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.31■□□□□ 0.68
Scamp3O35609 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Scamp3O35609 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.31■□□□□ 0.68
Scamp3O35609 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scamp3O35609 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.3■□□□□ 0.68
Scamp3O35609 Gm18284-201ENSMUST00000172604 624 ntBASIC19.3■□□□□ 0.68
Scamp3O35609 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.3■□□□□ 0.68
Scamp3O35609 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.3■□□□□ 0.68
Scamp3O35609 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scamp3O35609 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.3■□□□□ 0.68
Scamp3O35609 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scamp3O35609 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.29■□□□□ 0.68
Scamp3O35609 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scamp3O35609 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scamp3O35609 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Scamp3O35609 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.29■□□□□ 0.68
Scamp3O35609 Gm5874-201ENSMUST00000096101 508 ntBASIC19.29■□□□□ 0.68
Scamp3O35609 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scamp3O35609 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scamp3O35609 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scamp3O35609 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scamp3O35609 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.29■□□□□ 0.68
Scamp3O35609 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
Scamp3O35609 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.28■□□□□ 0.68
Scamp3O35609 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.28■□□□□ 0.68
Scamp3O35609 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scamp3O35609 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scamp3O35609 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scamp3O35609 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scamp3O35609 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Scamp3O35609 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scamp3O35609 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scamp3O35609 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scamp3O35609 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scamp3O35609 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.27■□□□□ 0.68
Scamp3O35609 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.27■□□□□ 0.68
Scamp3O35609 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Scamp3O35609 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scamp3O35609 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Scamp3O35609 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scamp3O35609 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scamp3O35609 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scamp3O35609 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scamp3O35609 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scamp3O35609 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.25■□□□□ 0.67
Scamp3O35609 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Scamp3O35609 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Scamp3O35609 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.25■□□□□ 0.67
Scamp3O35609 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Scamp3O35609 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Scamp3O35609 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scamp3O35609 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms