Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Npc1O35604 Gm11421-201ENSMUST00000122124 294 ntBASIC18.99■□□□□ 0.63
Npc1O35604 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1O35604 Gm8495-201ENSMUST00000188740 694 ntBASIC18.99■□□□□ 0.63
Npc1O35604 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.99■□□□□ 0.63
Npc1O35604 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.99■□□□□ 0.63
Npc1O35604 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1O35604 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.99■□□□□ 0.63
Npc1O35604 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1O35604 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1O35604 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1O35604 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Npc1O35604 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Npc1O35604 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Npc1O35604 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1O35604 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Npc1O35604 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1O35604 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1O35604 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1O35604 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.97■□□□□ 0.63
Npc1O35604 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.97■□□□□ 0.63
Npc1O35604 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1O35604 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1O35604 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1O35604 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.96■□□□□ 0.63
Npc1O35604 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1O35604 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Npc1O35604 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.95■□□□□ 0.62
Npc1O35604 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.95■□□□□ 0.62
Npc1O35604 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.95■□□□□ 0.62
Npc1O35604 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.95■□□□□ 0.62
Npc1O35604 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1O35604 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Npc1O35604 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.94■□□□□ 0.62
Npc1O35604 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Npc1O35604 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.94■□□□□ 0.62
Npc1O35604 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1O35604 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1O35604 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1O35604 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Npc1O35604 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1O35604 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1O35604 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.93■□□□□ 0.62
Npc1O35604 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1O35604 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1O35604 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Npc1O35604 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.93■□□□□ 0.62
Npc1O35604 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.93■□□□□ 0.62
Npc1O35604 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Npc1O35604 Gm40848-201ENSMUST00000221998 324 ntBASIC18.92■□□□□ 0.62
Npc1O35604 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1O35604 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1O35604 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1O35604 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Npc1O35604 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1O35604 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.91■□□□□ 0.62
Npc1O35604 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.91■□□□□ 0.62
Npc1O35604 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1O35604 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Npc1O35604 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Npc1O35604 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Npc1O35604 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Npc1O35604 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1O35604 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1O35604 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Npc1O35604 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms