Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.58■□□□□ 0.56
Abca4O35600 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Abca4O35600 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abca4O35600 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abca4O35600 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Abca4O35600 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.57■□□□□ 0.56
Abca4O35600 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Abca4O35600 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.57■□□□□ 0.56
Abca4O35600 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.56■□□□□ 0.56
Abca4O35600 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Abca4O35600 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.56■□□□□ 0.56
Abca4O35600 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Abca4O35600 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.55■□□□□ 0.56
Abca4O35600 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abca4O35600 Ank2-226ENSMUST00000189368 339 ntBASIC18.55■□□□□ 0.56
Abca4O35600 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Abca4O35600 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abca4O35600 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abca4O35600 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca4O35600 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Abca4O35600 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Abca4O35600 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.54■□□□□ 0.56
Abca4O35600 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca4O35600 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca4O35600 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca4O35600 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca4O35600 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca4O35600 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca4O35600 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abca4O35600 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Abca4O35600 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.53■□□□□ 0.56
Abca4O35600 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abca4O35600 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abca4O35600 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.53■□□□□ 0.56
Abca4O35600 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.53■□□□□ 0.56
Abca4O35600 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abca4O35600 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Abca4O35600 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Abca4O35600 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abca4O35600 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abca4O35600 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.52■□□□□ 0.56
Abca4O35600 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.52■□□□□ 0.56
Abca4O35600 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abca4O35600 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abca4O35600 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Abca4O35600 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Abca4O35600 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.52■□□□□ 0.56
Abca4O35600 Gm5417-201ENSMUST00000079706 384 ntBASIC18.52■□□□□ 0.56
Abca4O35600 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abca4O35600 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Abca4O35600 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abca4O35600 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abca4O35600 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abca4O35600 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.51■□□□□ 0.55
Abca4O35600 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.51■□□□□ 0.55
Abca4O35600 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.51■□□□□ 0.55
Abca4O35600 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abca4O35600 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abca4O35600 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abca4O35600 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abca4O35600 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.51■□□□□ 0.55
Abca4O35600 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abca4O35600 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca4O35600 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Abca4O35600 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Abca4O35600 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abca4O35600 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abca4O35600 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abca4O35600 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abca4O35600 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.49■□□□□ 0.55
Abca4O35600 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abca4O35600 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Abca4O35600 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abca4O35600 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abca4O35600 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Abca4O35600 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
Abca4O35600 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abca4O35600 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abca4O35600 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.47■□□□□ 0.55
Abca4O35600 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abca4O35600 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Abca4O35600 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abca4O35600 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Abca4O35600 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.47■□□□□ 0.55
Abca4O35600 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms