Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Clk4O35493 Gm12251-201ENSMUST00000117893 792 ntBASIC18.58■□□□□ 0.56
Clk4O35493 Gm43173-201ENSMUST00000202246 593 ntBASIC18.58■□□□□ 0.56
Clk4O35493 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clk4O35493 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.58■□□□□ 0.56
Clk4O35493 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Clk4O35493 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Clk4O35493 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clk4O35493 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clk4O35493 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.58■□□□□ 0.56
Clk4O35493 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clk4O35493 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clk4O35493 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk4O35493 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Clk4O35493 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.57■□□□□ 0.56
Clk4O35493 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.57■□□□□ 0.56
Clk4O35493 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Clk4O35493 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Clk4O35493 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk4O35493 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk4O35493 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.57■□□□□ 0.56
Clk4O35493 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clk4O35493 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clk4O35493 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Clk4O35493 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.56■□□□□ 0.56
Clk4O35493 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Clk4O35493 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.56■□□□□ 0.56
Clk4O35493 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clk4O35493 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clk4O35493 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clk4O35493 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Clk4O35493 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clk4O35493 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Clk4O35493 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.55■□□□□ 0.56
Clk4O35493 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.55■□□□□ 0.56
Clk4O35493 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clk4O35493 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clk4O35493 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clk4O35493 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Clk4O35493 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clk4O35493 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.54■□□□□ 0.56
Clk4O35493 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Clk4O35493 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clk4O35493 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.54■□□□□ 0.56
Clk4O35493 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Clk4O35493 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.53■□□□□ 0.56
Clk4O35493 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Clk4O35493 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.53■□□□□ 0.56
Clk4O35493 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clk4O35493 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.53■□□□□ 0.56
Clk4O35493 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clk4O35493 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clk4O35493 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Clk4O35493 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.52■□□□□ 0.55
Clk4O35493 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Clk4O35493 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 Smad6-203ENSMUST00000179458 273 ntBASIC18.51■□□□□ 0.55
Clk4O35493 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.51■□□□□ 0.55
Clk4O35493 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.51■□□□□ 0.55
Clk4O35493 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clk4O35493 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.5■□□□□ 0.55
Clk4O35493 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Clk4O35493 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms