Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Capn1O35350 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Capn1O35350 Gm10849-201ENSMUST00000100397 618 ntBASIC17.92■□□□□ 0.46
Capn1O35350 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.92■□□□□ 0.46
Capn1O35350 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.92■□□□□ 0.46
Capn1O35350 Gm7291-201ENSMUST00000199147 382 ntBASIC17.92■□□□□ 0.46
Capn1O35350 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.92■□□□□ 0.46
Capn1O35350 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capn1O35350 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Capn1O35350 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Capn1O35350 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Capn1O35350 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.91■□□□□ 0.46
Capn1O35350 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capn1O35350 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.91■□□□□ 0.46
Capn1O35350 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Capn1O35350 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capn1O35350 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capn1O35350 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Capn1O35350 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capn1O35350 Gm42642-201ENSMUST00000200683 355 ntBASIC17.9■□□□□ 0.46
Capn1O35350 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capn1O35350 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capn1O35350 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Capn1O35350 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capn1O35350 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capn1O35350 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capn1O35350 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capn1O35350 Mir6236-201ENSMUST00000184437 123 ntBASIC17.89■□□□□ 0.45
Capn1O35350 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capn1O35350 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Capn1O35350 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Capn1O35350 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capn1O35350 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Capn1O35350 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Gm27405-201ENSMUST00000184201 112 ntBASIC17.88■□□□□ 0.45
Capn1O35350 Gm29257-201ENSMUST00000186115 639 ntBASIC17.88■□□□□ 0.45
Capn1O35350 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.88■□□□□ 0.45
Capn1O35350 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Capn1O35350 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Capn1O35350 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capn1O35350 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.87■□□□□ 0.45
Capn1O35350 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Capn1O35350 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.87■□□□□ 0.45
Capn1O35350 Gm42569-201ENSMUST00000200539 472 ntBASIC17.87■□□□□ 0.45
Capn1O35350 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capn1O35350 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Capn1O35350 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Capn1O35350 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capn1O35350 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Capn1O35350 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Capn1O35350 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.85■□□□□ 0.45
Capn1O35350 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms