Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.24■□□□□ 0.51
Cx3cl1O35188 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.24■□□□□ 0.51
Cx3cl1O35188 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cl1O35188 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cl1O35188 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cl1O35188 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.21■□□□□ 0.51
Cx3cl1O35188 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.21■□□□□ 0.51
Cx3cl1O35188 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cx3cl1O35188 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cl1O35188 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cl1O35188 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cl1O35188 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cl1O35188 Gm11421-201ENSMUST00000122124 294 ntBASIC18.19■□□□□ 0.5
Cx3cl1O35188 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cl1O35188 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cl1O35188 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cl1O35188 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cx3cl1O35188 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cx3cl1O35188 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Gm40848-201ENSMUST00000221998 324 ntBASIC18.18■□□□□ 0.5
Cx3cl1O35188 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cx3cl1O35188 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cx3cl1O35188 AA386476-201ENSMUST00000098781 1665 ntBASIC18.17■□□□□ 0.5
Cx3cl1O35188 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cl1O35188 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Gm43060-201ENSMUST00000200621 289 ntBASIC18.16■□□□□ 0.5
Cx3cl1O35188 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Cx3cl1O35188 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms