Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gfra3O35118 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gfra3O35118 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Gfra3O35118 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.8■□□□□ 0.28
Gfra3O35118 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gfra3O35118 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gfra3O35118 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.8■□□□□ 0.28
Gfra3O35118 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gfra3O35118 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gfra3O35118 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gfra3O35118 Notumos-201ENSMUST00000151998 2659 ntBASIC16.8■□□□□ 0.28
Gfra3O35118 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gfra3O35118 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.79■□□□□ 0.28
Gfra3O35118 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.79■□□□□ 0.28
Gfra3O35118 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.79■□□□□ 0.28
Gfra3O35118 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gfra3O35118 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gfra3O35118 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gfra3O35118 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.78■□□□□ 0.28
Gfra3O35118 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.78■□□□□ 0.28
Gfra3O35118 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gfra3O35118 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gfra3O35118 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gfra3O35118 AA386476-201ENSMUST00000098781 1665 ntBASIC16.78■□□□□ 0.28
Gfra3O35118 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.78■□□□□ 0.28
Gfra3O35118 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gfra3O35118 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.78■□□□□ 0.28
Gfra3O35118 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gfra3O35118 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gfra3O35118 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gfra3O35118 Gm27801-201ENSMUST00000184174 223 ntBASIC16.77■□□□□ 0.28
Gfra3O35118 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.77■□□□□ 0.28
Gfra3O35118 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gfra3O35118 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gfra3O35118 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gfra3O35118 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Gfra3O35118 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gfra3O35118 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Gfra3O35118 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gfra3O35118 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gfra3O35118 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gfra3O35118 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.76■□□□□ 0.27
Gfra3O35118 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.76■□□□□ 0.27
Gfra3O35118 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Gfra3O35118 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
Gfra3O35118 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gfra3O35118 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gfra3O35118 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.75■□□□□ 0.27
Gfra3O35118 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.75■□□□□ 0.27
Gfra3O35118 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.75■□□□□ 0.27
Gfra3O35118 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.75■□□□□ 0.27
Gfra3O35118 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.75■□□□□ 0.27
Gfra3O35118 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gfra3O35118 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Gfra3O35118 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gfra3O35118 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gfra3O35118 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gfra3O35118 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gfra3O35118 Gm42642-201ENSMUST00000200683 355 ntBASIC16.74■□□□□ 0.27
Gfra3O35118 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gfra3O35118 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gfra3O35118 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gfra3O35118 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gfra3O35118 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms