Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Gm29257-201ENSMUST00000186115 639 ntBASIC17.29■□□□□ 0.36
Sh2b3O09039 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh2b3O09039 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2b3O09039 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2b3O09039 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2b3O09039 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Sh2b3O09039 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2b3O09039 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2b3O09039 Smad6-203ENSMUST00000179458 273 ntBASIC17.28■□□□□ 0.36
Sh2b3O09039 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Sh2b3O09039 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
Sh2b3O09039 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.28■□□□□ 0.36
Sh2b3O09039 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.28■□□□□ 0.36
Sh2b3O09039 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Sh2b3O09039 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2b3O09039 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2b3O09039 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sh2b3O09039 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.27■□□□□ 0.36
Sh2b3O09039 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.27■□□□□ 0.36
Sh2b3O09039 Gm7291-201ENSMUST00000199147 382 ntBASIC17.27■□□□□ 0.36
Sh2b3O09039 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.27■□□□□ 0.36
Sh2b3O09039 Gm42569-201ENSMUST00000200539 472 ntBASIC17.27■□□□□ 0.36
Sh2b3O09039 Gm42642-201ENSMUST00000200683 355 ntBASIC17.27■□□□□ 0.36
Sh2b3O09039 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2b3O09039 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2b3O09039 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2b3O09039 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2b3O09039 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.27■□□□□ 0.35
Sh2b3O09039 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2b3O09039 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh2b3O09039 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sh2b3O09039 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.26■□□□□ 0.35
Sh2b3O09039 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2b3O09039 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2b3O09039 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2b3O09039 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sh2b3O09039 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Sh2b3O09039 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2b3O09039 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.26■□□□□ 0.35
Sh2b3O09039 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2b3O09039 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2b3O09039 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh2b3O09039 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sh2b3O09039 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh2b3O09039 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Sh2b3O09039 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2b3O09039 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2b3O09039 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sh2b3O09039 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2b3O09039 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2b3O09039 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2b3O09039 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2b3O09039 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2b3O09039 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.24■□□□□ 0.35
Sh2b3O09039 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh2b3O09039 Mir6236-201ENSMUST00000184437 123 ntBASIC17.24■□□□□ 0.35
Sh2b3O09039 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sh2b3O09039 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sh2b3O09039 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sh2b3O09039 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2b3O09039 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2b3O09039 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.24■□□□□ 0.35
Sh2b3O09039 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2b3O09039 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sh2b3O09039 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2b3O09039 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.23■□□□□ 0.35
Sh2b3O09039 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh2b3O09039 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.23■□□□□ 0.35
Sh2b3O09039 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2b3O09039 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sh2b3O09039 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms