Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11bO08712 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11bO08712 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Tnfrsf11bO08712 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11bO08712 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.74■□□□□ 0.75
Tnfrsf11bO08712 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11bO08712 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.74■□□□□ 0.75
Tnfrsf11bO08712 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11bO08712 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tnfrsf11bO08712 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11bO08712 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11bO08712 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11bO08712 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf11bO08712 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnfrsf11bO08712 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf11bO08712 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf11bO08712 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms