Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sec22bO08547 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec22bO08547 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec22bO08547 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec22bO08547 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec22bO08547 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sec22bO08547 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec22bO08547 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec22bO08547 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec22bO08547 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Sec22bO08547 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.19■□□□□ 0.66
Sec22bO08547 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.19■□□□□ 0.66
Sec22bO08547 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.19■□□□□ 0.66
Sec22bO08547 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec22bO08547 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sec22bO08547 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.19■□□□□ 0.66
Sec22bO08547 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec22bO08547 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sec22bO08547 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec22bO08547 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec22bO08547 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sec22bO08547 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.18■□□□□ 0.66
Sec22bO08547 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec22bO08547 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec22bO08547 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Sec22bO08547 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec22bO08547 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec22bO08547 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Sec22bO08547 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
Sec22bO08547 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec22bO08547 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.17■□□□□ 0.66
Sec22bO08547 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.17■□□□□ 0.66
Sec22bO08547 AA386476-201ENSMUST00000098781 1665 ntBASIC19.17■□□□□ 0.66
Sec22bO08547 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sec22bO08547 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.17■□□□□ 0.66
Sec22bO08547 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.16■□□□□ 0.66
Sec22bO08547 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.16■□□□□ 0.66
Sec22bO08547 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Sec22bO08547 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec22bO08547 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.16■□□□□ 0.66
Sec22bO08547 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.15■□□□□ 0.66
Sec22bO08547 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sec22bO08547 Gm9847-201ENSMUST00000052528 599 ntBASIC19.15■□□□□ 0.66
Sec22bO08547 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec22bO08547 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.15■□□□□ 0.66
Sec22bO08547 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec22bO08547 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec22bO08547 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sec22bO08547 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec22bO08547 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sec22bO08547 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sec22bO08547 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sec22bO08547 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
Sec22bO08547 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sec22bO08547 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sec22bO08547 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sec22bO08547 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.13■□□□□ 0.65
Sec22bO08547 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.13■□□□□ 0.65
Sec22bO08547 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.13■□□□□ 0.65
Sec22bO08547 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.13■□□□□ 0.65
Sec22bO08547 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sec22bO08547 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec22bO08547 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec22bO08547 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec22bO08547 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.12■□□□□ 0.65
Sec22bO08547 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec22bO08547 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec22bO08547 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Sec22bO08547 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sec22bO08547 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sec22bO08547 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.12■□□□□ 0.65
Sec22bO08547 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec22bO08547 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Sec22bO08547 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
Sec22bO08547 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec22bO08547 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sec22bO08547 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec22bO08547 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms