Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
Gm4340L7N2C4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Gm7514-201ENSMUST00000209475 934 ntBASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Gm4340L7N2C4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Gm4340L7N2C4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Gm4340L7N2C4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Gm4340L7N2C4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Gm4340L7N2C4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.39■■□□□ 1.33
Gm4340L7N2C4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Gm4340L7N2C4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Gm4340L7N2C4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Gm4340L7N2C4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm4340L7N2C4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.36■■□□□ 1.33
Gm4340L7N2C4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm4340L7N2C4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm4340L7N2C4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm4340L7N2C4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm4340L7N2C4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Gm4340L7N2C4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm4340L7N2C4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm4340L7N2C4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Gm4340L7N2C4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.33■■□□□ 1.32
Gm4340L7N2C4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Gm4340L7N2C4 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.33■■□□□ 1.32
Gm4340L7N2C4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Gm4340L7N2C4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Gm4340L7N2C4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Gm4340L7N2C4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.32■■□□□ 1.32
Gm4340L7N2C4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.32■■□□□ 1.32
Gm4340L7N2C4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Gm4340L7N2C4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm4340L7N2C4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm4340L7N2C4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm4340L7N2C4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm4340L7N2C4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms