Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh9F8VPK8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pcdh9F8VPK8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh9F8VPK8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Gm12922-201ENSMUST00000120626 809 ntBASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh9F8VPK8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdh9F8VPK8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh9F8VPK8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Pcdh9F8VPK8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh9F8VPK8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Golgb1-201ENSMUST00000023534 498 ntBASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.86■□□□□ 0.77
Pcdh9F8VPK8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh9F8VPK8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms