Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Gm6139-201ENSMUST00000079261 882 ntBASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdh11xF6ZNL5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdh11xF6ZNL5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh11xF6ZNL5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh11xF6ZNL5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh11xF6ZNL5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh11xF6ZNL5 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.52■■□□□ 1.04
Pcdh11xF6ZNL5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdh11xF6ZNL5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdh11xF6ZNL5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Iqck-206ENSMUST00000208658 2891 ntBASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Mir7075-201ENSMUST00000184187 82 ntBASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh11xF6ZNL5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdh11xF6ZNL5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.49■■□□□ 1.03
Pcdh11xF6ZNL5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdh11xF6ZNL5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh11xF6ZNL5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms