Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Gm10517-202ENSMUST00000192970 758 ntBASIC9.62□□□□□ -0.87
Rnf213E9Q555 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 AC154649.1-201ENSMUST00000227392 384 ntBASIC9.61□□□□□ -0.87
Rnf213E9Q555 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rnf213E9Q555 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Gm7367-201ENSMUST00000057611 492 ntBASIC9.6□□□□□ -0.87
Rnf213E9Q555 Gm5417-201ENSMUST00000079706 384 ntBASIC9.6□□□□□ -0.87
Rnf213E9Q555 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Gm14464-201ENSMUST00000119658 1254 ntBASIC9.6□□□□□ -0.87
Rnf213E9Q555 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rnf213E9Q555 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Rnf213E9Q555 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 AC164883.3-201ENSMUST00000227396 1774 ntBASIC9.59□□□□□ -0.87
Rnf213E9Q555 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rnf213E9Q555 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rnf213E9Q555 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms