Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf4lE9Q2N0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Gm11421-201ENSMUST00000122124 294 ntBASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf4lE9Q2N0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Gm26833-201ENSMUST00000180899 440 ntBASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf4lE9Q2N0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Golph3-202ENSMUST00000226517 2359 ntBASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Gm40848-201ENSMUST00000221998 324 ntBASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf4lE9Q2N0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf4lE9Q2N0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf4lE9Q2N0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpsf4lE9Q2N0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms