Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.91■□□□□ 0.78
Col6a3E9PWQ3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Gm15378-201ENSMUST00000121894 207 ntBASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col6a3E9PWQ3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col6a3E9PWQ3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Col6a3E9PWQ3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col6a3E9PWQ3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col6a3E9PWQ3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col6a3E9PWQ3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Gm23634-201ENSMUST00000175071 91 ntBASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col6a3E9PWQ3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col6a3E9PWQ3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.86■□□□□ 0.77
Col6a3E9PWQ3 Gm13559-201ENSMUST00000120476 863 ntBASIC19.85■□□□□ 0.77
Col6a3E9PWQ3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a3E9PWQ3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a3E9PWQ3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a3E9PWQ3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.83■□□□□ 0.77
Col6a3E9PWQ3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col6a3E9PWQ3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col6a3E9PWQ3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col6a3E9PWQ3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col6a3E9PWQ3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.83■□□□□ 0.76
Col6a3E9PWQ3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col6a3E9PWQ3 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.83■□□□□ 0.76
Col6a3E9PWQ3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col6a3E9PWQ3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col6a3E9PWQ3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a3E9PWQ3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a3E9PWQ3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms