Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Shank1D3YZU1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank1D3YZU1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shank1D3YZU1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shank1D3YZU1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.43■□□□□ 0.38
Shank1D3YZU1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.43■□□□□ 0.38
Shank1D3YZU1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.43■□□□□ 0.38
Shank1D3YZU1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank1D3YZU1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank1D3YZU1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank1D3YZU1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank1D3YZU1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shank1D3YZU1 Gm38205-201ENSMUST00000192243 258 ntBASIC17.42■□□□□ 0.38
Shank1D3YZU1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank1D3YZU1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank1D3YZU1 Gm13534-201ENSMUST00000121169 513 ntBASIC17.42■□□□□ 0.38
Shank1D3YZU1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank1D3YZU1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank1D3YZU1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shank1D3YZU1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shank1D3YZU1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Shank1D3YZU1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank1D3YZU1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.4■□□□□ 0.38
Shank1D3YZU1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank1D3YZU1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shank1D3YZU1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Shank1D3YZU1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shank1D3YZU1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.39■□□□□ 0.37
Shank1D3YZU1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.39■□□□□ 0.37
Shank1D3YZU1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.39■□□□□ 0.37
Shank1D3YZU1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Shank1D3YZU1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.38■□□□□ 0.37
Shank1D3YZU1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank1D3YZU1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.37■□□□□ 0.37
Shank1D3YZU1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank1D3YZU1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shank1D3YZU1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms