Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim30cD3YVI9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim30cD3YVI9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Gm43530-201ENSMUST00000195920 274 ntBASIC21.08■□□□□ 0.97
Trim30cD3YVI9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
Trim30cD3YVI9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim30cD3YVI9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.08■□□□□ 0.96
Trim30cD3YVI9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim30cD3YVI9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim30cD3YVI9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trim30cD3YVI9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim30cD3YVI9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim30cD3YVI9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim30cD3YVI9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim30cD3YVI9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim30cD3YVI9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms