Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx8D3YU81 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.61■□□□□ 0.89
Rfx8D3YU81 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx8D3YU81 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx8D3YU81 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfx8D3YU81 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx8D3YU81 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx8D3YU81 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx8D3YU81 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.59■□□□□ 0.89
Rfx8D3YU81 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rfx8D3YU81 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx8D3YU81 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx8D3YU81 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.58■□□□□ 0.89
Rfx8D3YU81 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx8D3YU81 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx8D3YU81 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx8D3YU81 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx8D3YU81 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx8D3YU81 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx8D3YU81 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
Rfx8D3YU81 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx8D3YU81 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.54■□□□□ 0.88
Rfx8D3YU81 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx8D3YU81 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx8D3YU81 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rfx8D3YU81 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx8D3YU81 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx8D3YU81 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx8D3YU81 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx8D3YU81 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx8D3YU81 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx8D3YU81 Smad6-203ENSMUST00000179458 273 ntBASIC20.53■□□□□ 0.88
Rfx8D3YU81 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx8D3YU81 AA386476-201ENSMUST00000098781 1665 ntBASIC20.53■□□□□ 0.88
Rfx8D3YU81 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx8D3YU81 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx8D3YU81 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Gm43017-201ENSMUST00000198296 752 ntBASIC20.52■□□□□ 0.88
Rfx8D3YU81 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
Rfx8D3YU81 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx8D3YU81 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.52■□□□□ 0.87
Rfx8D3YU81 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfx8D3YU81 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.52■□□□□ 0.87
Rfx8D3YU81 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Rfx8D3YU81 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfx8D3YU81 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx8D3YU81 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx8D3YU81 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Rfx8D3YU81 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms