Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip3B9EHT4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip3B9EHT4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip3B9EHT4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip3B9EHT4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip3B9EHT4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip3B9EHT4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip3B9EHT4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Clip3B9EHT4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clip3B9EHT4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Gm11421-201ENSMUST00000122124 294 ntBASIC18.65■□□□□ 0.58
Clip3B9EHT4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip3B9EHT4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Clip3B9EHT4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clip3B9EHT4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.57
Clip3B9EHT4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip3B9EHT4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip3B9EHT4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clip3B9EHT4 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.63■□□□□ 0.57
Clip3B9EHT4 Gm5874-201ENSMUST00000096101 508 ntBASIC18.63■□□□□ 0.57
Clip3B9EHT4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.63■□□□□ 0.57
Clip3B9EHT4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip3B9EHT4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip3B9EHT4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip3B9EHT4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.62■□□□□ 0.57
Clip3B9EHT4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clip3B9EHT4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.62■□□□□ 0.57
Clip3B9EHT4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.62■□□□□ 0.57
Clip3B9EHT4 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.62■□□□□ 0.57
Clip3B9EHT4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clip3B9EHT4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clip3B9EHT4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clip3B9EHT4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Clip3B9EHT4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.61■□□□□ 0.57
Clip3B9EHT4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Clip3B9EHT4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip3B9EHT4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip3B9EHT4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip3B9EHT4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.61■□□□□ 0.57
Clip3B9EHT4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip3B9EHT4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms