Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.73■■□□□ 1.07
Krt28A6BLY7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Krt28A6BLY7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt28A6BLY7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt28A6BLY7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Krt28A6BLY7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Krt28A6BLY7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.71■■□□□ 1.07
Krt28A6BLY7 Gm27275-201ENSMUST00000184318 272 ntBASIC21.71■■□□□ 1.07
Krt28A6BLY7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt28A6BLY7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Krt28A6BLY7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt28A6BLY7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.7■■□□□ 1.06
Krt28A6BLY7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Krt28A6BLY7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Gm12896-201ENSMUST00000118430 226 ntBASIC21.69■■□□□ 1.06
Krt28A6BLY7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.69■■□□□ 1.06
Krt28A6BLY7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.69■■□□□ 1.06
Krt28A6BLY7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Krt28A6BLY7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt28A6BLY7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Gm5643-201ENSMUST00000117081 966 ntBASIC21.68■■□□□ 1.06
Krt28A6BLY7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Krt28A6BLY7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.67■■□□□ 1.06
Krt28A6BLY7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt28A6BLY7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt28A6BLY7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt28A6BLY7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Krt28A6BLY7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Krt28A6BLY7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Krt28A6BLY7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Krt28A6BLY7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Krt28A6BLY7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Krt28A6BLY7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Krt28A6BLY7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Krt28A6BLY7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Krt28A6BLY7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.64■■□□□ 1.05
Krt28A6BLY7 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.64■■□□□ 1.05
Krt28A6BLY7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Krt28A6BLY7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Krt28A6BLY7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.63■■□□□ 1.05
Krt28A6BLY7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Krt28A6BLY7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms