Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
IsxA1A546 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
IsxA1A546 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IsxA1A546 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
IsxA1A546 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
IsxA1A546 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
IsxA1A546 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IsxA1A546 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
IsxA1A546 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
IsxA1A546 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.03■□□□□ 0.48
IsxA1A546 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.03■□□□□ 0.48
IsxA1A546 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.03■□□□□ 0.48
IsxA1A546 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.03■□□□□ 0.48
IsxA1A546 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IsxA1A546 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IsxA1A546 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IsxA1A546 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.02■□□□□ 0.48
IsxA1A546 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IsxA1A546 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IsxA1A546 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.02■□□□□ 0.48
IsxA1A546 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IsxA1A546 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IsxA1A546 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IsxA1A546 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
IsxA1A546 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IsxA1A546 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.01■□□□□ 0.47
IsxA1A546 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.01■□□□□ 0.47
IsxA1A546 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
IsxA1A546 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IsxA1A546 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
IsxA1A546 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18■□□□□ 0.47
IsxA1A546 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
IsxA1A546 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
IsxA1A546 Gm18688-201ENSMUST00000204695 1859 ntBASIC18■□□□□ 0.47
IsxA1A546 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18■□□□□ 0.47
IsxA1A546 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.99■□□□□ 0.47
IsxA1A546 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.99■□□□□ 0.47
IsxA1A546 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IsxA1A546 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 7.1 ms