Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12d-1A0N8R0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-1A0N8R0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-1A0N8R0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav12d-1A0N8R0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-1A0N8R0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-1A0N8R0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms